Commit Graph

42 Commits

Author SHA1 Message Date
41206f65de Caler les faisceaux de vol, décimer l'openness et cibler les couches affichées
Trois chantiers liés à la qualité et au coût des rendus :

- Calage vertical des faisceaux : les passes d'une tuile peuvent être biaisées
  de quelques cm (±2,5 cm mesurés sur 1000_6882), créant des marches aux
  recouvrements. Les offsets par PointSourceId sont mesurés sur les points
  sol de la tuile (réf. médiane itérée) et retranchés ≥ 0,5 cm avant
  rastérisation, avec sidecar de cache et application au plancher bare-earth.
- Openness décimée ×2 : lancé de rayons sur grille par blocs (max/min) puis
  rééchantillonnage bilinéaire — 532 s → 40 s par tuile à 0,2 m sur CPU,
  signal archéologique préservé. Réglable --openness-downsample.
- Génération webapp concentrée sur les couches affichées : les défauts
  /api/generate, /api/preview et le sélecteur génèrent le panneau complet
  (slope, aspect, pos_open) au lieu d'aspect seul.
2026-09-19 00:53:22 +02:00
796e68c870 Supprimer le code mort (imports inutilisés, variable _xp, conseil GPU inatteignable) 2026-09-18 21:31:19 +02:00
bb086e308a Rendre effectif le délai de sécurité de 2 h des workers parallèles 2026-09-18 21:08:25 +02:00
d27b92a26a Add wall-clock timeout to parallel worker pool
Prevents indefinite hang if a worker gets stuck (deadlocked PDAL,
I/O stall). 2-hour safety net for the entire batch; remaining
futures are cancelled on timeout.
2026-09-07 21:20:19 +02:00
422f58d772 Split webapp for Raspberry Pi deployment, remote generation API and sync
La webapp (carte + vignettes) et la génération de tuiles se déploient sur
deux machines : image légère Dockerfile.webapp (FastAPI + Pillow AVIF
natif + pyproj) sur Raspberry Pi, pipeline complet sur la machine de
traitement. LIDAR_GENERATION_URL délègue /api/generate, /api/preview et
/api/status ; /api/sync ramène les tuiles par rsync puis régénère
vignettes et index localement. Token partagé optionnel
(LIDAR_API_TOKEN/LIDAR_REMOTE_TOKEN). Retire du dépôt les journaux
internes (.swival, audit-findings) et les données (data/, notebooks/).
Doc : docs/DEPLOY_WEBAPP.md.
2026-09-02 19:44:39 +02:00
8ca65155db Add web map with zone generation API, side job queue, and restore historical DTM hole rendering
- webapp.py: FastAPI serving the continuous map (port 8973) with
  /api/preview, /api/generate and /api/status; tiles are downloaded
  from IGN and processed in a logged subprocess, tracked live in a
  side "File de génération" panel that survives page reloads
- fetch_ign.py: download missing 1 km LiDAR HD tiles from the IGN
  geoplateforme before processing
- index.py: tile thumbnails and 500 m subtiles are now invalidated by
  mtime so regenerating a tile refreshes its cached images; progress
  logging per tile
- dtm.py: back to the historical gap handling (small gaps filled by
  fillnodata only, larger holes left as nodata rendered black);
  lowest-return floor only via --bare-earth, IGN class selection via
  --ign-classes
- cli.py: positional input now optional (--rebuild-index works alone)
- docker-compose.yml: serve (GPU, port 8973) and process services;
  launch via docker compose only (documented in AGENTS.md/AGENTS.md)
- tests: 131 passing, incl. regressions for thumbnail staleness,
  --rebuild-index without input, and nodata rendering
2026-08-31 18:07:14 +02:00
3d79a5ee72 carte continue: cropped images + continuous map + PDF download via jsPDF 2026-07-28 23:37:40 +02:00
54dbec145e prepare: add index module, update pipeline, tests, Dockerfile, and run.sh 2026-07-28 23:20:20 +02:00
8478106e51 Fix GPU bugs, restore aspect viz, fix anomaly mask, revert flow_acc to vectorized D8
GPU: num_gpus() returns real count via _gpu_candidates (was always 0/1),
available_gpu_ids() added. Pipeline: round-robin on real GPU host indices
instead of file enumerate index. _process_file_standalone signature simplified.

Restore generate_aspect using SharedDEM gradient (dy, dx). Colormap twilight
0-360 fixed range. VIZ_STEPS back to 16.

Flow accumulation: revert to vectorized numpy D8 direction + module-level
numba accumulator (cached, top-down sort) with Python fallback. Priority-flood
NaN-aware. Log1p transform.

Anomaly mask: replace RMS+fixed 2sigma threshold (was blank) with weighted
sum of |z-score| + adaptive percentile threshold. Absolute z-score captures
both positive and negative deviations. 6% signal detected vs 0% before.
2026-06-01 23:03:19 +02:00
89f3333b65 Add anomaly mask: automatic threshold detection across all viz layers 2026-05-31 18:34:45 +02:00
929fac9aa0 Remove LRM, TPI, aspect, curvature, paths + add flow accumulation, directional Gabor wavelets, multi-radius ray-tracing 2026-05-31 17:19:31 +02:00
b5b6787956 Add --gpu flag to select specific GPU(s) for processing 2026-05-31 16:06:58 +02:00
266214fe3e Fix 12 bugs: D8 flow accumulation, PDF AVIF support, GPU memory leaks, dead code, SAILORE sigma scaling 2026-05-31 15:13:11 +02:00
30122c71ed Performance optimizations and rendering improvements
GPU multi-processing fix:
- gpu.py: revert to CUDA_VISIBLE_DEVICES approach with lazy CuPy init
  (Device.use() caused CUDA_ERROR_NO_BINARY_FOR_GPU on GPU 1)
- CuPy is imported lazily on first to_gpu() call, allowing
  CUDA_VISIBLE_DEVICES to be set before CUDA context creation
- nvidia-smi used for GPU count detection (no CUDA import needed)
- pipeline.py: add tip message suggesting -w N when multiple GPUs detected

Rendering improvements:
- Title: split into bold title (14pt) + italic description (10pt)
- North arrow: moved inside data area (top-right) with transparent
  background — no longer overlaps title
- Colorbar: full height (compass gap removed), ScalarFormatter with
  useOffset=False to prevent scientific notation on small values

Performance:
- rendering.py: save matplotlib figure to BytesIO instead of temp PNG
  file — eliminates disk I/O between matplotlib and PIL
- visualizations.py: cap max_dist at 300 for ray-tracing (SVF,
  openness, aniso_open) — avoids 500+ iterations at 0.2m resolution
- pipeline.py: deduplicate n_gpus calculation in parallel path
2026-05-15 12:32:51 +02:00
a3f7b44874 Fix multi-GPU with lazy CuPy init + rendering improvements
GPU fix:
- Revert to CUDA_VISIBLE_DEVICES approach but with lazy CuPy init
- gpu.py: CuPy is no longer imported at module level; _init_gpu()
  imports it lazily on first to_gpu() call. This allows workers to
  set CUDA_VISIBLE_DEVICES before CuPy creates a CUDA context.
- gpu.py: detect GPU count via nvidia-smi (no CUDA context needed)
- pipeline.py: each worker sets CUDA_VISIBLE_DEVICES=N before CuPy
  init, so each process uses only its assigned GPU

Rendering improvements:
- Title: split into bold title (14pt) + italic description (10pt)
  instead of single 15pt bold block
- North arrow: moved inside data area (top-right corner) with
  semi-transparent white background for readability over data
- Colorbar: full height (no gap for compass rose), added
  ScalarFormatter(useOffset=False) to avoid scientific notation
- Colorbar compass rose gap removed since north arrow is now
  inside the data area
2026-05-15 12:24:57 +02:00
5af53a390f Add multi-GPU support and fix scale bar / location map overlap
Multi-GPU:
- gpu.py: lazy CuPy initialization so CUDA_VISIBLE_DEVICES takes
  effect before context creation in worker processes
- gpu.py: detect GPU count via nvidia-smi (no CUDA import needed)
- gpu.py: add set_active_gpu() to assign workers to specific GPUs
- pipeline.py: distribute files across GPUs (file % num_gpus) in
  parallel mode so both GPUs are used simultaneously
- pipeline.py: log GPU count when multiple GPUs detected

Layout fixes:
- rendering.py: move scale bar left of location map to avoid overlap
  (scale bar ends at fig_x=0.78, map starts at 0.82)
- rendering.py: expand location map inset to 0.16x0.13 fig coords
- rendering.py: return bounds from _download_location_map so imshow
  extent matches the actual IGN tile coverage (80km context)
- ign.py: add min_zoom parameter to download_ign_tiles, fixing the
  location map that was broken (zoom 10 blocked by hardcoded min_zoom=15)
2026-05-15 12:00:34 +02:00
c634db573a Fix corrupted COPC detection, add CSF→SMRF fallback, improve MSRM colormap, add SVF and anisotropic openness
- validate_laz: verify point data accessibility (not just headers) to detect
  corrupted COPC files that pass header checks but fail on data reads
- classify_ground: fallback from CSF to SMRF when CSF produces no ground
  points or PDAL errors (fixes 2/9 failing tiles)
- MSRM: preserve sign in weighted combination so RdBu_r colormap shows
  both red (elevated) and blue (depressed) instead of red only
- Add Sky-View Factor (SVF) visualization: cos²(horizon angle) over 16
  directions, excellent for archaeological earthwork detection
- Add Anisotropic Openness: directional weighting (NW-SE/NE-SW) enhances
  linear feature detection aligned with common settlement patterns
- Remove anomalies and flow visualizations (replaced by SVF + aniso_open)
- Location inset: use IGN topographic map at zoom 10 instead of simplified
  France outline, with red rectangle marker and fallback
- Remove flow (hydrological accumulation) from VIZ_STEPS
2026-05-15 01:38:09 +02:00
da454bd23e Improve visualizations: adaptive scales, revert z-score to std normalization
- MSRM/TPI/roughness/anomalies: revert z-score (x-mean)/std to std normalization x/std
  to preserve contrast and visibility of linear features (paths, ditches, trenches)
- MSRM: adaptive scales based on resolution, archaeological weight combination
- TPI: extend from 2 to 4 scales (3m/15m/50m/200m) with weighted combination
- Hillshade: 8 directions instead of 4, altitude 35° instead of 30°
- LRM: adaptive sigma based on resolution
- Openness: doubled radius (100m instead of 50m)
- Roughness: multi-scale (3m fine + 15m broad) instead of single 5x5 window
- Anomalies: uses MSRM multi-scale relief instead of single LRM 15m
- Wavelet: 8 adaptive scales, std normalization, archaeological weights
- Remove svf (Sky-View Factor) and local_dominance visualizations
- Add AVIF format support (default), quality 98
- Add multi-resolution support (-r 0.5,0.2)
- Improve Ctrl+C handling for immediate process termination
- Update rendering.py descriptions for all modified visualizations
2026-05-14 23:12:08 +02:00
57ffdbae67 Add multi-resolution support and remove PDF generation
- --resolution now accepts comma-separated values (e.g. 0.5,0.2)
- Additional resolutions get suffixed output dirs: basename_r0p2/
- DTM files are named basename_dtm_r0p2.tif for extra resolutions
- Ground classification is done once and shared across resolutions
- PDF report generation removed per user request
- Fix --file argument to accept full filenames with extensions
2026-05-14 21:29:45 +02:00
6aef7b8af3 Add WebP quality control and selective visualization (--only / --skip)
- WebP output now uses quality=85 by default (down from lossless),
  reducing file size by ~75% (35MB → 5-8MB per visualization)
- Added --quality N (1-100) and --lossless flags in CLI and run.sh
- Added --only and --skip to select/exclude specific visualizations
  (e.g., --only hillshade,svf,lrm or --skip ortho,topo)
- VIZ_STEPS filtering is done in LidarArchaeoPipeline.__init__
- SharedDEM is skipped when all selected visualizations already exist
- Invalid visualization names are validated at startup with clear error
2026-05-14 21:15:21 +02:00
96920b95cc List all processed LAZ files with status in pipeline summary
Show each file with ✓/✗ before the success/fail counts, so the user
can see at a glance which files succeeded and which failed.
2026-05-14 20:49:30 +02:00
a98d0836b7 Skip SharedDEM computation when all visualizations already exist
Two optimizations to avoid ~2min wasted per file on re-runs:

1. pipeline.py: Check which visualizations need regeneration before
   computing SharedDEM. If all WebP outputs exist, skip SharedDEM
   entirely. If only IGN overlays need updating, also skip SharedDEM.

2. visualizations.py: Make SharedDEM attributes lazy (filled, gradient,
   lrm_15) so only the data actually needed is computed. For example,
   if only hillshade is regenerated, LRM at 15m is never calculated.
2026-05-14 20:40:51 +02:00
0d46c96681 Add LAZ integrity check to skip corrupted files early
Validate file readability before PDAL classification. Corrupted/truncated
files are detected instantly via laspy header read and skipped with a clear
error message pointing to re-download, instead of wasting time on PDAL
and repair attempts that will fail anyway.
2026-05-14 17:59:32 +02:00
f97e41eaea Remove RRIM and Multi-Hillshade RGB, fix DTM resolution reuse bug, add --init to docker run
- Remove generate_rrim, generate_multi_hillshade, _compute_openness_both
- Remove corresponding VIZ_STEPS entries, COLORMAPS, RGB_LEGENDS, and tests
- Fix DTM resolution mismatch: existing DTM at different resolution is now
  regenerated instead of silently reused
- Propagate actual DTM resolution to visualizations and rendering
- Add --init to docker run commands for proper signal handling on Ctrl+C
- Add .playwright-mcp/ to .gitignore
2026-05-14 02:19:42 +02:00
735f185773 Remove ETA display from visualization progress logs 2026-05-14 01:18:52 +02:00
978be54cf7 Fix lambda signatures for rrim and multi_hillshade to accept shared kwarg
Same issue as pos_open/neg_open — lambdas in VIZ_STEPS need shared=None
parameter since the pipeline passes shared=shared to all visualization functions.
2026-05-14 01:07:48 +02:00
989bb71497 Add RRIM, Multi-Hillshade RGB, and Local Dominance visualizations
Three new visualizations complementing existing SVF/openness/LRM/MSRM:

- RRIM (Red Relief Image Map): RGB composite combining positive openness
  (R), inverted slope (G), negative openness (B). Uses ray-tracing
  to compute both openness values in a single pass.

- Multi-Hillshade RGB: 3 azimuths (315°, 135°, 45°) mapped to R/G/B
  channels with slope blending. Color reveals structure orientation.

- Local Dominance: (dem - local_min) / (local_max - local_min) using
  min/max filters. Measures local height position — complements openness.

Also adds:
- _compute_openness_both() helper for shared ray-tracing (used by RRIM)
- xp_maximum_filter() in gpu.py (GPU/CPU abstraction)
- Entries in COLORMAPS, RGB_LEGENDS, VIZ_STEPS, and is_rgb detection
- All NaN handling follows existing patterns (nan_mask restoration)
2026-05-14 01:03:47 +02:00
56fa84b288 Remove PMF, fix NaN in gradient visualizations, fix pos_open/neg_open shared param
- Remove PMF from ground classification options (PDAL recommends SMRF over PMF)
- Auto-detection now uses CSF for urban/complex terrain instead of PMF
- Add z_std > 30m heuristic to auto-select CSF for complex terrain
- Fix pos_open/neg_open lambda missing 'shared' parameter (NameError in workers)
- Fix NaN mask not restored in hillshade, slope, aspect, curvature
  (gradient-based products computed on filled DEM lost NaN transparency)
- Add nan_mask parameter to _save_tif for centralized NaN restoration
- DTM TIF kept by default (no longer deleted after WebP conversion)
2026-05-14 00:50:45 +02:00
15cd77456d Fix bugs and improve pipeline flexibility
- Fix gpu_cleanup import missing in visualizations.py (NameError in workers)
- Fix t_pdf referenced before assignment when PDF is skipped
- Skip classification+DTM when DTM exists regardless of --force
- --force now only regenerates WebP/PDF, not classification/DTM
- --force-classification forces reclassification when needed
- Add laspy repair fallback for corrupt LAZ files (EVLR errors)
- Keep DTM TIF by default for reuse (--no-keep-tif to delete)
- Increase space between image and bottom cartouche (0.12→0.19)
2026-05-14 00:08:25 +02:00
a1a5078e8b Skip ground classification when DTM already exists
If the DTM .tif exists and --force is not set, skip both ground
classification and DTM generation entirely. Previously, the pipeline
would spend 3+ minutes reclassifying ground even when the DTM was
already present and would be reused anyway.

Also includes: SharedDEM cache, enhanced WebP cartouche (compass rose,
adaptive scale bar, enriched info bar), removed COG/viewer, UTF-8
fix for parallel workers, skip logic for DTM and PDF.
2026-05-13 23:41:21 +02:00
a37b8848ab Interface web cartographique: COG + TiTiler + viewer MapLibre
- Ajout de convert_to_cog() et generate_cog_metadata() dans rendering.py
- Nouveau module viewer.py: génération HTML MapLibre GL JS avec couches et opacité
- Nouveau module server.py: serveur FastAPI avec TiTiler pour tuiles COG
- Pipeline: étapes 5 (COGs) et 6 (viewer web) après le rapport PDF
- CLI: flag --no-viewer pour désactiver la génération du viewer
- run.sh: commande 'serve' pour démarrer le serveur sur port 8000
- Dockerfile: ajout de rio-cogeo, titiler.core, fastapi, uvicorn, piexif
- setup.py: point d'entrée lidar-server
2026-05-10 17:15:37 +02:00
5c155e4999 Layout uniforme WebP: axes fixes + aspect='equal' pour superposition géolocalisée
- Positions d'axes fixes (data_left/bottom/width/height_frac) pour alignement
  pixel-parfait entre terrain et ortho/topo
- aspect='equal' au lieu de 'auto' pour conserver les proportions géographiques
- Colorbar descriptive pour les visualisations RGB (ortho/topo)
- Comblage des petits trous DTM (< 1m) via rasterio.fill.fillnodata
- Suppression de la visualisation "dépressions"
- Hillshade composite: 0.7*hillshade + 0.3*cos(slope)
- D8 flow accumulation accéléré par numba JIT (fallback Python)
- Flag --keep-tif pour conserver les TIFF intermédiaires
- --force supprime aussi les TIF existants avant régénération
- ETA affiché pendant la génération des visualisations
- Répertoires temp dans temp/ pour traitement parallèle
2026-05-10 14:46:31 +02:00
a88e430f02 Audit: corrections de bugs identifiés
- rendering.py: colorbar cassée quand NaN mask actif — créer un
  ScalarMappable avec le cmap sauvegardé au lieu de rely sur
  l'image RGBA qui n'a plus de cmap
- rendering.py: nettoyage du PNG temporaire avec try/finally et
  missing_ok=True pour éviter les fichiers orphelins
- gpu.py: to_gpu() convertit en float32 au lieu de float64 pour
  réduire la consommation mémoire GPU
- dtm.py: utiliser _file_basename() de pipeline.py au lieu de
  dupliquer la logique d'extraction du basename
- pipeline.py: docstring corrigé (18 visualisations, pas 19)
- cli.py: --file supporte aussi les noms sans .copc
  (recherche .copc.laz et .copc.las en plus de .laz et .las)
2026-05-10 12:11:13 +02:00
c244a12ed5 Fix basename: retirer .copc.laz au lieu de .laz seul
Les fichiers LiDAR HD IGN ont l'extension .copc.laz (double extension).
Path.stem ne retire que .laz, laissant .copc dans le basename.
Ajout de _file_basename() qui retire les extensions connues
dans l'ordre: .copc.laz, .copc.las, .laz, .las.
2026-05-10 12:02:32 +02:00
0ff2b992ff Nettoyage des répertoires temporaires après traitement
- _process_file_standalone: supprime temp_{basename} après chaque fichier
- process_all: supprime aussi les répertoires temp_* orphelins des workers
- 18 Go de fichiers .las orphelins supprimés manuellement
2026-05-10 11:41:03 +02:00
ba6fb64754 Suppression de la visualisation Texture GLCM
- Suppression de generate_texture() de visualizations.py
- Suppression de l'entrée 'texture' de VIZ_STEPS et COLORMAPS
- Suppression du test TestTexture
- Mise à jour README (19 → 18 visualisations)
- Mise à jour AGENTS.md (17 → 16 fonctions generate_*)
2026-05-10 03:30:07 +02:00
67380d0424 Pipeline LiDAR: classification sol auto + pré-traitement ELM + fix warnings
- Ajout classification automatique du sol (SMRF/PMF/CSF) avec détection
  heuristique (ratio retours uniques > 0.6 → PMF urbain, sinon SMRF)
- Pré-traitement PDAL recommandé avant classification: ELM + outlier
  removal (cell=5.0, threshold=2.0 adapté au calcaire rocailleux)
- Options CLI: --ground-classification {auto,smrf,pmf,csf} et
  --force-classification pour forcer la reclassification
- Fix double logging (logger.propagate = False)
- Fix --force non transmis dans run.sh (réécriture parsing arguments)
- Fix warning numpy 'partition will ignore mask': conversion MaskedArray
  en ndarray avant np.percentile()
- Ajout liblaszip8 + lazrs pour support LAZ dans Docker et laspy
- Tests unitaires pour PMF, CSF et auto-détection
2026-05-10 03:00:33 +02:00
e7e6468a56 Préfixer les logs par le nom du fichier LAZ en cours
Ajout d'un FilePrefixFilter qui préfixe chaque message avec [basename]
quand un fichier est en cours de traitement. Les workers paralleles
affichent ainsi clairement quel fichier produit chaque log.
2026-05-10 01:32:19 +02:00
85aaf5f278 Logging multiprocessing: configure logger dans les workers spawn + compteur de progression 2026-05-10 01:30:01 +02:00
e66a71d885 Fix CUDA fork: spawn multiprocessing + graceful GPU fallback
- multiprocessing.set_start_method('spawn') pour éviter la corruption
  du contexte CUDA dans les processus forkés
- to_gpu() et xp_*_filter() attrapent les erreurs CUDA et tombent
  sur CPU au lieu de crasher
- _gpu_available() vérifie que le GPU est utilisable avant chaque opération
- gpu_cleanup() attrape les exceptions au cas où le GPU serait indisponible
2026-05-10 01:04:02 +02:00
e734c9c472 Suppression éclairage solaire, GPU accéléré, --file multi, tests unitaires
- Suppression de generate_solar (éclairage solaire) des visualisations
- Accélération GPU de hillshade, slope, aspect, curvature, depressions,
  anomalies, roughness, texture GLCM, flow (sink filling)
- Nettoyage mémoire GPU entre visualisations (gpu_cleanup)
- Correction OOM texture GLCM: calcul entropie bin par bin au lieu d'un
  tableau 3D massif sur GPU
- Correction bug: xp_minimum_filter manquant dans imports visualizations
- Option --file accepte plusieurs noms complets sans extension
- run.sh affiche l'aide si appelé sans arguments
- Option --test pour exécuter les tests unitaires dans Docker
- Filtre ReturnNumber>=1 intégré dans le pipeline PDAL (plus d'erreur SMRF)
- 60 tests unitaires: GPU, visualisations, rendering, DTM, pipeline, CLI
- Ajout pytest au Dockerfile
2026-05-10 00:57:39 +02:00
405b0d20f8 Refactor pipeline en modules + logging verbose/debug + options CLI
- Découpage du monolithe process_lidar.py (~2750 lignes) en package
  lidar_pipeline/ avec 9 modules (gpu, dtm, visualizations, ign,
  rendering, pipeline, cli, __init__, __main__)
- Logging configurable: -v (verbose avec timestamps) et --debug
  (détails internes fichier:ligne)
- Option --force pour régénérer tous les fichiers (par défaut skip
  les WebP existants)
- Option --file NOM pour traiter un seul fichier LAZ (tests rapides)
- ProcessPoolExecutor avec répertoires temporaires uniques par worker
- Suppression du code mort (geomorphons, hillshade_ne, nodata_mask)
- Aucun fichier TIFF résiduel après conversion WebP
- setup.py pour installation pip, stub process_lidar.py compatible
2026-05-10 00:15:29 +02:00